BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C01LP1|AL427586
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1063 1805 0.0
3x_Contig1428 108 2e-23
3x_Contig550 108 2e-23
3x_Contig1693 104 3e-22
>3x_Contig1063
Length = 5012
Score = 1805 bits (900), Expect = 0.0
Identities = 953/979 (97%), Gaps = 4/979 (0%)
Strand = Plus / Minus
Query: 4 agcagcattctgctctagatcggtcwat-gaccctttggcatcaatattgatgctctgat 62
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1066 agcagcattctgctctagatcggtcaattgaccctttggcatcaatattgatgctctgat 1007
Query: 63 caaragctgttgacatcttctaagatgagttctccagagattacttctcaaggcactatt 122
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 caaaagctgttgacatcctctaagatgagttctccagagattacttctcaaggcactatt 947
Query: 123 agcaaaavacatgaggaacacggtgaatgttaagcaaacatactccacaaagtcttgaga 182
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 agcaaaaaacatgaggaacacggtgaatgttaagcaaacatactccacaaagtcttgaga 887
Query: 183 attttggattctttcattgatggttcccaacacttgtttgavacttaaggctcttacata 242
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 886 attttggattctttcattgatggttcccaacacttgtttgaaacttaaggctcttacata 827
Query: 243 acgatcccatatttgggagavatgatgcaactttgcattttcatacacgtcctgcataav 302
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 826 acgatcccatatttgggagaaatgatgcaactttgcattttcatacacgtcctgcataaa 767
Query: 303 avctgagatgtcatatcgtatagcatcttggacaattgtatgtttctcattcaaagacca 362
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aactgagatgtcatatcgtatagcatcttggacaattgtatgtttctcattcaaagacca 707
Query: 363 gagacaccgcatgavggtatcgaatctatcatgaggaaataacaagavattacccgcgat 422
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 706 gagacaccgcatgaaggtatcgaatctatcatgaggaaataacaagaaattacccgcgat 647
Query: 423 caaagtcgtacaagcaaatctccaaatgavgttagttaggttgggatcatcgattctgat 482
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 646 caaagtcgtacaagcaaatctccaaatgaagttagttaggttgggatcatcgattctgat 587
Query: 483 ttcgctgatcgcrattggatttacacttttgtatgcagtttggratggvtcctctttctc 542
|||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 586 ttcgctgatcgcaattggatttacacttttgtatgcagtttggaatggatcctctttctc 527
Query: 543 taavagttgtaacatatctatccagacaaagtttctccaatttatatcgtatggttttva 602
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 526 taaaagttgtaacatatctatccagacaaagtttctccaatttatatcgtatggttttaa 467
Query: 603 vagaggtacccagttctttaattctgtggctgaggtattaggtttggcattaaggtttgg 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aagaggtacccagttctttaattctgtggctgaggtattaggtttggcattaaggtttgg 407
Query: 663 taagctcagtaatttggcgtctgatggggagacacaaatgagattttgtgagtbaaagtc 722
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 406 taagctcagtaatttggcgtctgatggggagacacaaatgagattttgtaagttaaagtc 347
Query: 723 gttcaaatccagcagttgagcaaaatcaggtttcacattccagtgtaatgaatctgcttg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gttcaaatccagcagttgagcaaaatcaggtttcacattccagtgtaatgaatctgcttg 287
Query: 783 ctgggttgaaagttgttgttgttgttgctgctgctgcggtatattagacagcaattgtaa 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctgggttgaaagttgttgttgttgttgctgctgctgcggtatattagacagcaattgtaa 227
Query: 843 atgttcctgctgtcgttgtggtggctgttgttgttgttgttgttgttgttgttgttgttg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atgttcctgctgtcgttgtggtggctgttgttgttgttgttgttgttgttgttgttgttg 167
Query: 903 ttgttgatgttgtggctgttgttgctgtgacagctgcggcr--cgaaatgggcagttgtg 960
|||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 166 ttgttgatgttgtggctgttgttgctgtgacagctgcggcagcagcaat-ggcagttgtg 108
Query: 961 taggtatttgtggttgtcc 979
|||||||||||||||||||
Sbjct: 107 taggtatttgtggttgtcc 89
>3x_Contig1428
Length = 9146
Score = 108 bits (54), Expect = 2e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 857 gttgtggtggctgttgttgttgttgttgttgttgttgttgttgttgttgttgatgttgtg 916
||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 371 gttgttgttgctgctgttgttgttgttgttgttgttgttgttgttgttgttgttgttgtt 430
Query: 917 gctgttgttgctgt 930
||||||||||||||
Sbjct: 431 gctgttgttgctgt 444
>3x_Contig550
Length = 2221
Score = 108 bits (54), Expect = 2e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 857 gttgtggtggctgttgttgttgttgttgttgttgttgttgttgttgttgttgatgttgtg 916
||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1941 gttgttgttgctgctgttgttgttgttgttgttgttgttgttgttgttgttgttgttgtt 2000
Query: 917 gctgttgttgctgt 930
||||||||||||||
Sbjct: 2001 gctgttgttgctgt 2014
>3x_Contig1693
Length = 15531
Score = 104 bits (52), Expect = 3e-22
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 867 ctgttgttgttgttgttgttgttgttgttgttgttgttgttgatgttgtggctgttgttg 926
|||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||
Sbjct: 8937 ctgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttg 8878
Query: 927 ctgt 930
||||
Sbjct: 8877 ctgt 8874
Score = 102 bits (51), Expect = 1e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 868 tgttgttgttgttgttgttgttgttgttgttgttgttgttgatgttgtggctgttgttgc 927
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||
Sbjct: 8927 tgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgttgctgttgctgc 8868
Query: 928 tgt 930
|||
Sbjct: 8867 tgt 8865
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9944
Number of Sequences: 1807
Number of extensions: 9944
Number of successful extensions: 1568
Number of sequences better than 1.0e-20: 4
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)